Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 AL163051.1-201ENST00000569214 1512 ntBASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ABHD17AP3-201ENST00000503096 1137 ntBASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 KHSRPP1-201ENST00000427983 1768 ntBASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 FUT8-AS1-201ENST00000621019 1521 ntBASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CDC42SE1Q9NRR8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms