Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 TARDBPP1-201ENST00000442013 1203 ntBASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC097359.3-201ENST00000603982 1210 ntBASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AC009118.2-201ENST00000613275 655 ntBASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 LINC02199-201ENST00000506655 2702 ntBASIC14.46□□□□□ -0.09
SDHAF3Q9NRP4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 AP003680.1-201ENST00000598970 3660 ntBASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 AC008741.2-201ENST00000612792 3115 ntBASIC14.46□□□□□ -0.1
SDHAF3Q9NRP4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 AC114501.2-201ENST00000439631 535 ntBASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 AC135586.1-201ENST00000539323 574 ntBASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 MIR4313-201ENST00000580760 101 ntBASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SDHAF3Q9NRP4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms