Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 PRELID1P1-202ENST00000567272 903 ntBASIC14.37□□□□□ -0.11
HMG20AQ9NP66 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.37□□□□□ -0.11
HMG20AQ9NP66 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 AL592424.1-201ENST00000563624 1536 ntBASIC14.36□□□□□ -0.11
HMG20AQ9NP66 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 AL139424.1-201ENST00000607572 797 ntBASIC14.36□□□□□ -0.11
HMG20AQ9NP66 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMG20AQ9NP66 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 KRT8P44-201ENST00000441609 1350 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 DGCR9-201ENST00000609630 2415 ntBASIC14.35□□□□□ -0.11
HMG20AQ9NP66 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMG20AQ9NP66 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms