Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 KRT18P21-201ENST00000515767 1272 ntBASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 AC005912.2-201ENST00000619492 2400 ntBASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SND1-IT1Q9HBX3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.58□□□□□ -0.71
SND1-IT1Q9HBX3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AC025062.2-201ENST00000605477 670 ntBASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AC126365.1-201ENST00000578585 1514 ntBASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AC117489.1-201ENST00000625169 3217 ntBASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SND1-IT1Q9HBX3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SND1-IT1Q9HBX3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms