Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 BRI3BPP1-201ENST00000594224 787 ntBASIC18.44■□□□□ 0.54
RNF41Q9H4P4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 MIR8072-201ENST00000614241 80 ntBASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AC009090.5-201ENST00000624886 2285 ntBASIC18.44■□□□□ 0.54
RNF41Q9H4P4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF41Q9H4P4 AC087481.3-201ENST00000602886 1894 ntBASIC18.43■□□□□ 0.54
RNF41Q9H4P4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 AL139384.1-201ENST00000612143 3047 ntBASIC18.43■□□□□ 0.54
RNF41Q9H4P4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 AL442647.2-201ENST00000429864 857 ntBASIC18.43■□□□□ 0.54
RNF41Q9H4P4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 AC092552.1-201ENST00000547243 906 ntBASIC18.43■□□□□ 0.54
RNF41Q9H4P4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 LINC02084-201ENST00000606069 1096 ntBASIC18.43■□□□□ 0.54
RNF41Q9H4P4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RNF41Q9H4P4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AL035633.1-201ENST00000406139 838 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AC098850.1-201ENST00000419919 790 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AL049840.4-201ENST00000602422 811 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AC025181.2-201ENST00000606994 802 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AC025048.6-201ENST00000634326 1161 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AL358472.5-202ENST00000641448 1267 ntBASIC18.42■□□□□ 0.54
RNF41Q9H4P4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF41Q9H4P4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF41Q9H4P4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms