Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC136604.1-201ENST00000418535 575 ntBASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC079140.1-201ENST00000508039 487 ntBASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 LINC01225-203ENST00000563550 1244 ntBASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SHANK2-AS3Q9BTD1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 AC106881.1-201ENST00000605849 3329 ntBASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SHANK2-AS3Q9BTD1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms