Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 PI4KAP1-204ENST00000612579 1703 ntBASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 TSPY5P-201ENST00000426936 936 ntBASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 FAM8A3P-201ENST00000427218 844 ntBASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AF228730.7-201ENST00000641842 219 ntBASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SEC22CQ9BRL7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 AC089987.1-201ENST00000551654 2209 ntBASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.33□□□□□ -0.27
SEC22CQ9BRL7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AC005562.1-201ENST00000583030 3219 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ABCD1P5-201ENST00000445663 754 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AC005412.3-201ENST00000580309 715 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AC011498.5-201ENST00000592027 486 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AC145285.6-201ENST00000604632 637 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MTHFR-210ENST00000641407 2387 ntBASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC22CQ9BRL7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms