Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 AP006288.1-201ENST00000446065 395 ntBASIC14.39□□□□□ -0.11
SNX18Q96RF0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX18Q96RF0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX18Q96RF0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CICP20-201ENST00000443330 2801 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC243562.2-201ENST00000561247 970 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC061975.2-201ENST00000581722 295 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 SPTSSB-204ENST00000617024 1292 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC010327.5-201ENST00000586923 3061 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SNX18Q96RF0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNX18Q96RF0 AC020658.6-201ENST00000623564 1870 ntBASIC14.38□□□□□ -0.11
SNX18Q96RF0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms