Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
GAFA1Q96PS6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 PPT1-215ENST00000641471 2368 ntBASIC13.02□□□□□ -0.32
GAFA1Q96PS6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.02□□□□□ -0.32
GAFA1Q96PS6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AC236430.1-201ENST00000402231 743 ntBASIC13.02□□□□□ -0.33
GAFA1Q96PS6 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AC000095.1-201ENST00000603208 874 ntBASIC13.02□□□□□ -0.33
GAFA1Q96PS6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AC008761.3-201ENST00000624803 892 ntBASIC13.02□□□□□ -0.33
GAFA1Q96PS6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
GAFA1Q96PS6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC093004.1-201ENST00000508850 424 ntBASIC13.01□□□□□ -0.33
GAFA1Q96PS6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms