Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
IFT43Q96FT9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
IFT43Q96FT9 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 SNX18-202ENST00000343017 3140 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 HLA-V-204ENST00000476601 1289 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC004890.2-204ENST00000481968 304 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC239800.4-201ENST00000603712 296 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC073347.1-201ENST00000421633 2643 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC011477.6-201ENST00000604980 1927 ntBASIC16.25■□□□□ 0.19
IFT43Q96FT9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.25■□□□□ 0.19
IFT43Q96FT9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IFT43Q96FT9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 AC027369.6-201ENST00000525520 931 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 AC105021.1-202ENST00000570572 669 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 LINC02560-201ENST00000596379 459 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 AL136982.4-201ENST00000437689 1740 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 TSPY26P-202ENST00000565928 3884 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
IFT43Q96FT9 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.24■□□□□ 0.19
IFT43Q96FT9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IFT43Q96FT9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms