Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM11Q96F44 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM11Q96F44 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 TARDBPP1-201ENST00000442013 1203 ntBASIC16.62■□□□□ 0.25
TRIM11Q96F44 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM11Q96F44 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM11Q96F44 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 AL080243.2-201ENST00000418783 582 ntBASIC16.61■□□□□ 0.25
TRIM11Q96F44 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 SNHG9-202ENST00000564014 471 ntBASIC16.61■□□□□ 0.25
TRIM11Q96F44 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM11Q96F44 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AC084364.1-201ENST00000551967 1556 ntBASIC16.6■□□□□ 0.25
TRIM11Q96F44 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms