Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.74□□□□□ -0.53
RNF183Q96D59 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.74□□□□□ -0.53
RNF183Q96D59 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 SERBP1P5-201ENST00000510079 1181 ntBASIC11.74□□□□□ -0.53
RNF183Q96D59 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.74□□□□□ -0.53
RNF183Q96D59 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.74□□□□□ -0.53
RNF183Q96D59 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.74□□□□□ -0.53
RNF183Q96D59 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 AC004233.3-201ENST00000607794 1269 ntBASIC11.74□□□□□ -0.53
RNF183Q96D59 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RNF183Q96D59 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 BTBD7P1-201ENST00000447253 1453 ntBASIC11.74□□□□□ -0.53
RNF183Q96D59 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
RNF183Q96D59 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
RNF183Q96D59 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RNF183Q96D59 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RNF183Q96D59 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RNF183Q96D59 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RNF183Q96D59 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RNF183Q96D59 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 PIN1P1-201ENST00000412108 996 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.73□□□□□ -0.53
RNF183Q96D59 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.73□□□□□ -0.53
RNF183Q96D59 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.73□□□□□ -0.53
RNF183Q96D59 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 AL592424.1-201ENST00000563624 1536 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.73□□□□□ -0.53
RNF183Q96D59 AC009407.1-201ENST00000568958 598 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
RNF183Q96D59 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RNF183Q96D59 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.73□□□□□ -0.53
RNF183Q96D59 AC027307.3-201ENST00000594262 1100 ntBASIC11.73□□□□□ -0.53
RNF183Q96D59 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms