Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL136982.4-201ENST00000437689 1740 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC023024.2-201ENST00000623561 1993 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AC104109.2-201ENST00000602919 1418 ntBASIC15.16■□□□□ 0.02
VPS33AQ96AX1 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VPS33AQ96AX1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC099522.2-201ENST00000607001 744 ntBASIC15.15■□□□□ 0.02
VPS33AQ96AX1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.15■□□□□ 0.02
VPS33AQ96AX1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 AC148477.4-201ENST00000613430 1793 ntBASIC15.15■□□□□ 0.02
VPS33AQ96AX1 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VPS33AQ96AX1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 LINC00552-201ENST00000625151 2579 ntBASIC15.14■□□□□ 0.01
VPS33AQ96AX1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC002056.1-201ENST00000395613 760 ntBASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC004987.2-201ENST00000395959 1148 ntBASIC15.14■□□□□ 0.01
VPS33AQ96AX1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC074386.1-202ENST00000463561 864 ntBASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 AC013726.1-201ENST00000563747 2285 ntBASIC15.14■□□□□ 0.01
VPS33AQ96AX1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VPS33AQ96AX1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms