Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 AC148477.4-201ENST00000613430 1793 ntBASIC13.79□□□□□ -0.2
TMEM54Q969K7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 AL391069.4-201ENST00000609583 481 ntBASIC13.79□□□□□ -0.2
TMEM54Q969K7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 AL158212.4-201ENST00000624062 1286 ntBASIC13.79□□□□□ -0.2
TMEM54Q969K7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM54Q969K7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM54Q969K7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 AC025181.2-201ENST00000606994 802 ntBASIC13.78□□□□□ -0.2
TMEM54Q969K7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM54Q969K7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM54Q969K7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms