Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.69■□□□□ 0.26
DDX1Q92499 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DDX1Q92499 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DDX1Q92499 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
DDX1Q92499 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DDX1Q92499 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 AC098614.1-201ENST00000368528 745 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
DDX1Q92499 TSSK5P-201ENST00000423978 907 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 RPS2P32-201ENST00000439199 892 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 AC004890.2-204ENST00000481968 304 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 ZNF890P-202ENST00000530367 1156 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
DDX1Q92499 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 AL590560.3-201ENST00000623350 461 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DDX1Q92499 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DDX1Q92499 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DDX1Q92499 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.68■□□□□ 0.26
DDX1Q92499 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DDX1Q92499 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.68■□□□□ 0.26
DDX1Q92499 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DDX1Q92499 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
DDX1Q92499 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
DDX1Q92499 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
DDX1Q92499 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.67■□□□□ 0.26
DDX1Q92499 MST1L-201ENST00000442552 2185 ntBASIC16.67■□□□□ 0.26
DDX1Q92499 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.67■□□□□ 0.26
DDX1Q92499 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
DDX1Q92499 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.67■□□□□ 0.26
DDX1Q92499 RN7SL618P-201ENST00000477850 296 ntBASIC16.67■□□□□ 0.26
DDX1Q92499 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC074044.1-201ENST00000609673 707 ntBASIC16.67■□□□□ 0.26
DDX1Q92499 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.67■□□□□ 0.26
DDX1Q92499 AL109936.8-201ENST00000641772 604 ntBASIC16.67■□□□□ 0.26
DDX1Q92499 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
DDX1Q92499 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
DDX1Q92499 AC100757.3-201ENST00000622361 1406 ntBASIC16.67■□□□□ 0.26
DDX1Q92499 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.67■□□□□ 0.26
DDX1Q92499 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DDX1Q92499 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.66■□□□□ 0.26
DDX1Q92499 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 AC023024.2-201ENST00000623561 1993 ntBASIC16.66■□□□□ 0.26
DDX1Q92499 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
DDX1Q92499 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DDX1Q92499 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms