Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GIMAP3P-201ENST00000495150 836 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC107373.2-201ENST00000607735 490 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC023024.2-201ENST00000623561 1993 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 CLK3P2-201ENST00000427566 1453 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC148477.4-201ENST00000613430 1793 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC079776.1-201ENST00000401540 1152 ntBASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM3Q8TF72 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 AL049840.4-201ENST00000602422 811 ntBASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 AC009118.2-201ENST00000613275 655 ntBASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM3Q8TF72 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 SDHAP3-202ENST00000515467 728 ntBASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHROOM3Q8TF72 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms