Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 RNPS1P1-201ENST00000507437 918 ntBASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AL160237.2-201ENST00000556165 472 ntBASIC15.35■□□□□ 0.05
HIPK4Q8NE63 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC021097.1-201ENST00000607902 574 ntBASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC005593.1-201ENST00000624894 515 ntBASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HIPK4Q8NE63 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 AC041040.2-201ENST00000622926 2899 ntBASIC15.34■□□□□ 0.05
HIPK4Q8NE63 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 MIR4515-201ENST00000584082 81 ntBASIC15.34■□□□□ 0.05
HIPK4Q8NE63 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms