Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 KRT8P4-201ENST00000509735 1454 ntBASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CCDC168Q8NDH2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AC127024.7-201ENST00000625101 200 ntBASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AL133267.1-201ENST00000398220 340 ntBASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AL023803.2-201ENST00000620080 638 ntBASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCDC168Q8NDH2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 RNU1-114P-201ENST00000365297 166 ntBASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms