Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC148477.4-201ENST00000613430 1793 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AC004832.2-201ENST00000426397 482 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AL139010.1-201ENST00000454878 894 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LINC01225-203ENST00000563550 1244 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AC026120.1-201ENST00000611536 926 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 C20orf181-201ENST00000623918 480 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LINC00552-201ENST00000625151 2579 ntBASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLDN22Q8N7P3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 HTR5BP-201ENST00000430851 1154 ntBASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 RN7SL589P-201ENST00000481268 310 ntBASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 RNA5SP410-201ENST00000516285 106 ntBASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AP000842.3-202ENST00000569238 1080 ntBASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 AC091951.1-201ENST00000512854 2465 ntBASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN22Q8N7P3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms