Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 BX640515.1-201ENST00000617215 977 ntBASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 AC004790.2-201ENST00000623588 572 ntBASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 CR383656.2-201ENST00000548656 2254 ntBASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 AC009090.5-201ENST00000624886 2285 ntBASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.76■□□□□ 0.11
TRIM42Q8IWZ5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 LINC00552-201ENST00000625151 2579 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AC108073.2-201ENST00000464002 357 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 MIR4313-201ENST00000580760 101 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AC120114.3-201ENST00000611923 658 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 MIR7706-201ENST00000613747 67 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AC008735.5-201ENST00000623544 497 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AC116407.3-201ENST00000623905 1129 ntBASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRIM42Q8IWZ5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AL359183.1-201ENST00000623796 2132 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms