Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 TSPY15P-201ENST00000457163 923 ntBASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 AC073592.4-201ENST00000623827 446 ntBASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 AP006294.2-201ENST00000641667 209 ntBASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
CROCCP3Q8IVE0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 CYP2A7P1-201ENST00000595391 815 ntBASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CROCCP3Q8IVE0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CROCCP3Q8IVE0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms