Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AJ011931.1-201ENST00000618749 2492 ntBASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ZBED1P1-201ENST00000502364 1930 ntBASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 UNC93B7-201ENST00000509439 705 ntBASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC061975.2-201ENST00000581722 295 ntBASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 AL161645.1-201ENST00000622716 1255 ntBASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NUDCD3Q8IVD9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AC005912.2-201ENST00000619492 2400 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AC098831.1-202ENST00000438821 336 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AC009947.1-201ENST00000444350 727 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 EMBP1-201ENST00000458200 901 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 AL450472.2-201ENST00000603663 1156 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SPTSSB-204ENST00000617024 1292 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.65■□□□□ 0.1
NUDCD3Q8IVD9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms