Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 AC211486.1-202ENST00000416371 468 ntBASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 AC092183.1-201ENST00000469884 875 ntBASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 AC211476.1-201ENST00000503899 468 ntBASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 MIR4321-201ENST00000592276 80 ntBASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 ACTL9-202ENST00000612068 1252 ntBASIC15.77■□□□□ 0.12
CRLF3Q8IUI8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 AC126365.1-201ENST00000578585 1514 ntBASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 AC007686.3-201ENST00000619017 3487 ntBASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CRLF3Q8IUI8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 KRT8P44-201ENST00000441609 1350 ntBASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AC232323.1-201ENST00000540724 2099 ntBASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 REXO1L5P-201ENST00000622260 2098 ntBASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AC074386.1-202ENST00000463561 864 ntBASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AC009090.5-201ENST00000624886 2285 ntBASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CRLF3Q8IUI8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 AL390755.1-201ENST00000623716 2027 ntBASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CRLF3Q8IUI8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms