Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 ENPP7P5-201ENST00000541031 1031 ntBASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 AC107373.2-201ENST00000607735 490 ntBASIC17.46■□□□□ 0.39
TRIM50Q86XT4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.46■□□□□ 0.39
TRIM50Q86XT4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM50Q86XT4 DRD5P1-201ENST00000456605 1438 ntBASIC17.46■□□□□ 0.39
TRIM50Q86XT4 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.46■□□□□ 0.38
TRIM50Q86XT4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM50Q86XT4 AC010491.1-201ENST00000563101 2797 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 BOLA2P3-201ENST00000404566 256 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AC106760.1-201ENST00000508690 800 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PTP4A1P2-201ENST00000546033 454 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AP005482.1-201ENST00000563722 1273 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PCDHB19P-201ENST00000570871 2371 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AC024909.3-201ENST00000611513 2257 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 AC093525.8-201ENST00000624099 1342 ntBASIC17.45■□□□□ 0.38
TRIM50Q86XT4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM50Q86XT4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 FLJ16779-201ENST00000612722 7638 ntBASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC026410.3-201ENST00000514280 936 ntBASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC015910.1-201ENST00000579400 975 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms