Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H3F3CQ6NXT2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC133539.2-201ENST00000604757 467 ntBASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
H3F3CQ6NXT2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 AC069224.1-201ENST00000566372 1715 ntBASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 AC018892.3-201ENST00000623986 2499 ntBASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
H3F3CQ6NXT2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 AC079776.1-201ENST00000401540 1152 ntBASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 ARSEP1-201ENST00000420443 635 ntBASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 TTTY23B-201ENST00000442790 549 ntBASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 GPR53P-205ENST00000457298 1084 ntBASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
H3F3CQ6NXT2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms