Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 RN7SL163P-201ENST00000583100 276 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AC005324.6-201ENST00000587972 613 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AF254983.2-201ENST00000612331 135 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 AC092978.1-202ENST00000637590 1327 ntBASIC19.42■□□□□ 0.7
RC3H1Q5TC82 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RC3H1Q5TC82 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 EEF1DP6-201ENST00000449232 372 ntBASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AC106794.1-201ENST00000506935 792 ntBASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RC3H1Q5TC82 MTHFR-217ENST00000641820 1569 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC007274.2-201ENST00000421675 662 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 RNMTL1P1-201ENST00000454103 560 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC012618.1-201ENST00000461223 412 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 MARK2P5-201ENST00000507649 634 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC018635.2-201ENST00000608625 364 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC068587.8-201ENST00000641239 219 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AC011676.5-201ENST00000624864 2660 ntBASIC19.4■□□□□ 0.7
RC3H1Q5TC82 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RC3H1Q5TC82 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RC3H1Q5TC82 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RC3H1Q5TC82 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms