Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 MYO15B-237ENST00000642007 4893 ntBASIC15.91■□□□□ 0.14
PRAMEP78395 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.91■□□□□ 0.14
PRAMEP78395 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRAMEP78395 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.91■□□□□ 0.14
PRAMEP78395 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 AC105250.1-201ENST00000509378 2057 ntBASIC15.9■□□□□ 0.14
PRAMEP78395 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PRAMEP78395 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AZGP1P1-201ENST00000411909 902 ntBASIC15.9■□□□□ 0.14
PRAMEP78395 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.9■□□□□ 0.14
PRAMEP78395 AC027612.4-201ENST00000605371 583 ntBASIC15.9■□□□□ 0.14
PRAMEP78395 LINC00628-201ENST00000628516 1289 ntBASIC15.9■□□□□ 0.14
PRAMEP78395 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AC022532.1-201ENST00000624563 1728 ntBASIC15.9■□□□□ 0.14
PRAMEP78395 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PRAMEP78395 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRAMEP78395 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.9■□□□□ 0.14
PRAMEP78395 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEP78395 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEP78395 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.89■□□□□ 0.13
PRAMEP78395 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 TMBIM7P-203ENST00000641617 1718 ntBASIC15.89■□□□□ 0.13
PRAMEP78395 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEP78395 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEP78395 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRAMEP78395 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.89■□□□□ 0.13
PRAMEP78395 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.89■□□□□ 0.13
PRAMEP78395 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRAMEP78395 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRAMEP78395 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 352.5 ms