Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC124067.4-201ENST00000519691 2379 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 KLF2P2-201ENST00000416807 1039 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC012618.1-201ENST00000461223 412 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC019193.1-201ENST00000506678 823 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 ECM1P1-201ENST00000604092 1279 ntBASIC18.4■□□□□ 0.54
CNTNAP1P78357 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.4■□□□□ 0.54
CNTNAP1P78357 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CNTNAP1P78357 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP1P78357 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP1P78357 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP1P78357 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.39■□□□□ 0.54
CNTNAP1P78357 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP1P78357 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CNTNAP1P78357 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 AC148477.4-201ENST00000613430 1793 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 AL596087.1-201ENST00000400979 1969 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 AC069224.1-201ENST00000566372 1715 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 AC097065.1-201ENST00000425737 517 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 AL136301.1-201ENST00000615830 422 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 AC244157.2-201ENST00000616239 1006 ntBASIC18.39■□□□□ 0.53
CNTNAP1P78357 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CNTNAP1P78357 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CNTNAP1P78357 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 OARD1-204ENST00000464633 717 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 RNF41-210ENST00000552244 716 ntTSL 3 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 AC132192.2-201ENST00000596206 1147 ntBASIC18.38■□□□□ 0.53
CNTNAP1P78357 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 AC025181.2-201ENST00000606994 802 ntBASIC18.38■□□□□ 0.53
CNTNAP1P78357 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.38■□□□□ 0.53
CNTNAP1P78357 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 AD000864.1-201ENST00000624076 2295 ntBASIC18.38■□□□□ 0.53
CNTNAP1P78357 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CNTNAP1P78357 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CNTNAP1P78357 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTNAP1P78357 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms