Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TCAF2P1-201ENST00000291129 2421 ntBASIC15.52■□□□□ 0.08
SRP54P61011 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SRP54P61011 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SRP54P61011 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 TTTY23B-201ENST00000442790 549 ntBASIC15.52■□□□□ 0.08
SRP54P61011 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.52■□□□□ 0.08
SRP54P61011 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.52■□□□□ 0.08
SRP54P61011 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.52■□□□□ 0.08
SRP54P61011 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.52■□□□□ 0.08
SRP54P61011 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SRP54P61011 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SRP54P61011 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.52■□□□□ 0.07
SRP54P61011 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SRP54P61011 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
SRP54P61011 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.52■□□□□ 0.07
SRP54P61011 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
SRP54P61011 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.52■□□□□ 0.07
SRP54P61011 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SRP54P61011 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.51■□□□□ 0.07
SRP54P61011 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.51■□□□□ 0.07
SRP54P61011 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
SRP54P61011 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
SRP54P61011 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.51■□□□□ 0.07
SRP54P61011 AL008721.1-201ENST00000609964 604 ntBASIC15.51■□□□□ 0.07
SRP54P61011 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.51■□□□□ 0.07
SRP54P61011 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.51■□□□□ 0.07
SRP54P61011 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SRP54P61011 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SRP54P61011 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SRP54P61011 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SRP54P61011 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.5■□□□□ 0.07
SRP54P61011 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.5■□□□□ 0.07
SRP54P61011 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 PCDHA1-201ENST00000378133 2726 ntBASIC15.5■□□□□ 0.07
SRP54P61011 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.5■□□□□ 0.07
SRP54P61011 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SRP54P61011 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.5■□□□□ 0.07
SRP54P61011 ARSEP1-201ENST00000420443 635 ntBASIC15.5■□□□□ 0.07
SRP54P61011 AL442647.2-201ENST00000429864 857 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 924.4 ms