Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN20P56880 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN20P56880 UGT1A2P-201ENST00000454886 866 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 AC004890.2-204ENST00000481968 304 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.45□□□□□ -0.1
CLDN20P56880 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 AC243562.2-201ENST00000561247 970 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN20P56880 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.45□□□□□ -0.1
CLDN20P56880 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 CICP24-201ENST00000605464 2705 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 BNIP3P1-202ENST00000550043 1585 ntBASIC14.44□□□□□ -0.1
CLDN20P56880 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CLDN20P56880 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 AC004987.2-201ENST00000395959 1148 ntBASIC14.44□□□□□ -0.1
CLDN20P56880 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN20P56880 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.44□□□□□ -0.1
CLDN20P56880 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN20P56880 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.44□□□□□ -0.1
CLDN20P56880 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN20P56880 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN20P56880 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN20P56880 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLDN20P56880 AC087499.5-201ENST00000452760 1342 ntBASIC14.43□□□□□ -0.1
CLDN20P56880 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CLDN20P56880 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms