Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN8P56748 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 AC106881.1-201ENST00000605849 3329 ntBASIC14.94□□□□□ -0.02
CLDN8P56748 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDN8P56748 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDN8P56748 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CLDN8P56748 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 AL133215.2-201ENST00000609242 977 ntBASIC14.94□□□□□ -0.02
CLDN8P56748 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDN8P56748 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLDN8P56748 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDN8P56748 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN8P56748 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 AL627223.1-201ENST00000416693 442 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDN8P56748 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDN8P56748 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.93□□□□□ -0.02
CLDN8P56748 AC093520.2-201ENST00000561830 333 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CLDN8P56748 RN7SL828P-201ENST00000607615 303 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 AC003101.2-201ENST00000612557 442 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 AC007292.2-201ENST00000593524 1812 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 WASH3P-207ENST00000560956 1394 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CLDN8P56748 FO538757.1-201ENST00000623083 1397 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 PKD1P5-201ENST00000532415 10291 ntBASIC14.93□□□□□ -0.02
CLDN8P56748 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDN8P56748 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms