Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.01□□□□□ -0.17
GFRA1P56159 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
GFRA1P56159 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
GFRA1P56159 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
GFRA1P56159 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GFRA1P56159 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
GFRA1P56159 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
GFRA1P56159 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
GFRA1P56159 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
GFRA1P56159 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 DKFZP434H168-201ENST00000567381 1905 ntBASIC14□□□□□ -0.17
GFRA1P56159 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14□□□□□ -0.17
GFRA1P56159 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 U91328.1-201ENST00000437528 223 ntBASIC14□□□□□ -0.17
GFRA1P56159 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
GFRA1P56159 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14□□□□□ -0.17
GFRA1P56159 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14□□□□□ -0.17
GFRA1P56159 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
GFRA1P56159 AC093813.1-201ENST00000605066 256 ntBASIC14□□□□□ -0.17
GFRA1P56159 AC025181.2-201ENST00000606994 802 ntBASIC14□□□□□ -0.17
GFRA1P56159 AC107373.2-201ENST00000607735 490 ntBASIC14□□□□□ -0.17
GFRA1P56159 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 AC105250.1-201ENST00000509378 2057 ntBASIC14□□□□□ -0.17
GFRA1P56159 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 AC084364.1-201ENST00000551967 1556 ntBASIC14□□□□□ -0.17
GFRA1P56159 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14□□□□□ -0.17
GFRA1P56159 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
GFRA1P56159 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14□□□□□ -0.17
GFRA1P56159 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.99□□□□□ -0.17
GFRA1P56159 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.99□□□□□ -0.17
GFRA1P56159 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.99□□□□□ -0.17
GFRA1P56159 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.99□□□□□ -0.17
GFRA1P56159 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.99□□□□□ -0.17
GFRA1P56159 ACTG1P3-201ENST00000431775 1114 ntBASIC13.99□□□□□ -0.17
GFRA1P56159 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.99□□□□□ -0.17
GFRA1P56159 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GFRA1P56159 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.99□□□□□ -0.17
GFRA1P56159 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.99□□□□□ -0.17
GFRA1P56159 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.99□□□□□ -0.17
GFRA1P56159 AC015936.2-201ENST00000593177 259 ntBASIC13.99□□□□□ -0.17
GFRA1P56159 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.99□□□□□ -0.17
GFRA1P56159 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.99□□□□□ -0.17
GFRA1P56159 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.99□□□□□ -0.17
GFRA1P56159 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
GFRA1P56159 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GFRA1P56159 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms