Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.81■□□□□ 0.28
RAD23BP54727 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 SPDYE18-201ENST00000510091 1050 ntBASIC16.81■□□□□ 0.28
RAD23BP54727 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.81■□□□□ 0.28
RAD23BP54727 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.81■□□□□ 0.28
RAD23BP54727 SPCS2P1-201ENST00000561636 679 ntBASIC16.81■□□□□ 0.28
RAD23BP54727 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.81■□□□□ 0.28
RAD23BP54727 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAD23BP54727 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RAD23BP54727 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.8■□□□□ 0.28
RAD23BP54727 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 AC009090.5-201ENST00000624886 2285 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.8■□□□□ 0.28
RAD23BP54727 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAD23BP54727 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 HMGN1P19-201ENST00000436976 333 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 BCRP1-201ENST00000444246 691 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.8■□□□□ 0.28
RAD23BP54727 AC135586.1-201ENST00000539323 574 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.8■□□□□ 0.28
RAD23BP54727 AL096865.1-201ENST00000606796 927 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 AJ011932.1-201ENST00000621707 465 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 AC105250.1-201ENST00000509378 2057 ntBASIC16.8■□□□□ 0.28
RAD23BP54727 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.8■□□□□ 0.28
RAD23BP54727 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.8■□□□□ 0.28
RAD23BP54727 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAD23BP54727 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.79■□□□□ 0.28
RAD23BP54727 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RAD23BP54727 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD23BP54727 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.79■□□□□ 0.28
RAD23BP54727 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.79■□□□□ 0.28
RAD23BP54727 SLED1-202ENST00000512051 380 ntBASIC16.79■□□□□ 0.28
RAD23BP54727 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAD23BP54727 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD23BP54727 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD23BP54727 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD23BP54727 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD23BP54727 AC004790.1-201ENST00000612686 536 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms