Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EFNA3P52797 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.67□□□□□ -0.06
EFNA3P52797 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.67□□□□□ -0.06
EFNA3P52797 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 KRT18P43-201ENST00000469825 1281 ntBASIC14.66□□□□□ -0.06
EFNA3P52797 GIMAP3P-201ENST00000495150 836 ntBASIC14.66□□□□□ -0.06
EFNA3P52797 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.66□□□□□ -0.06
EFNA3P52797 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC124283.3-201ENST00000570869 594 ntBASIC14.66□□□□□ -0.06
EFNA3P52797 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.66□□□□□ -0.06
EFNA3P52797 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
EFNA3P52797 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EFNA3P52797 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.66□□□□□ -0.06
EFNA3P52797 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.66□□□□□ -0.06
EFNA3P52797 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 TNRC18P3-201ENST00000441896 2691 ntBASIC14.65□□□□□ -0.06
EFNA3P52797 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
EFNA3P52797 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.65□□□□□ -0.06
EFNA3P52797 VDAC1P7-201ENST00000462417 847 ntBASIC14.65□□□□□ -0.06
EFNA3P52797 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 AC015910.1-201ENST00000579400 975 ntBASIC14.65□□□□□ -0.06
EFNA3P52797 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.65□□□□□ -0.06
EFNA3P52797 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.65□□□□□ -0.06
EFNA3P52797 AL049840.4-201ENST00000602422 811 ntBASIC14.65□□□□□ -0.06
EFNA3P52797 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
EFNA3P52797 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EFNA3P52797 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms