Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CENPAP49450 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CENPAP49450 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.34□□□□□ -0.11
CENPAP49450 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CENPAP49450 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.33□□□□□ -0.11
CENPAP49450 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 AC006058.4-201ENST00000624016 1670 ntBASIC14.33□□□□□ -0.11
CENPAP49450 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.33□□□□□ -0.11
CENPAP49450 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.33□□□□□ -0.11
CENPAP49450 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CENPAP49450 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 TFAMP1-201ENST00000412727 736 ntBASIC14.33□□□□□ -0.12
CENPAP49450 AC026396.1-201ENST00000419388 421 ntBASIC14.33□□□□□ -0.12
CENPAP49450 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.33□□□□□ -0.12
CENPAP49450 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.33□□□□□ -0.12
CENPAP49450 RNA5SP410-201ENST00000516285 106 ntBASIC14.33□□□□□ -0.12
CENPAP49450 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.33□□□□□ -0.12
CENPAP49450 AC073389.1-201ENST00000595595 795 ntBASIC14.33□□□□□ -0.12
CENPAP49450 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 AC099522.2-201ENST00000607001 744 ntBASIC14.33□□□□□ -0.12
CENPAP49450 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 AC091812.2-201ENST00000619081 385 ntBASIC14.33□□□□□ -0.12
CENPAP49450 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.33□□□□□ -0.12
CENPAP49450 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.33□□□□□ -0.12
CENPAP49450 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CENPAP49450 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.33□□□□□ -0.12
CENPAP49450 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.32□□□□□ -0.12
CENPAP49450 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.32□□□□□ -0.12
CENPAP49450 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.32□□□□□ -0.12
CENPAP49450 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.32□□□□□ -0.12
CENPAP49450 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CENPAP49450 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC14.32□□□□□ -0.12
CENPAP49450 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CENPAP49450 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CENPAP49450 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CENPAP49450 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CENPAP49450 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CENPAP49450 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CENPAP49450 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.32□□□□□ -0.12
CENPAP49450 GPX1P2-201ENST00000429271 606 ntBASIC14.32□□□□□ -0.12
CENPAP49450 AC105233.2-201ENST00000523697 349 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms