Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 PIN4P1-201ENST00000451079 396 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 RN7SL67P-201ENST00000492147 296 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.51■□□□□ 0.39
TM4SF4P48230 SAMD11P1-201ENST00000571429 661 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.51■□□□□ 0.39
TM4SF4P48230 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.51■□□□□ 0.39
TM4SF4P48230 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF4P48230 FAM90A2P-201ENST00000511144 1395 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 FAM90A25P-201ENST00000528404 1395 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 AC106886.4-201ENST00000623557 2502 ntBASIC17.51■□□□□ 0.39
TM4SF4P48230 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF4P48230 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TM4SF4P48230 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TM4SF4P48230 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TM4SF4P48230 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.5■□□□□ 0.39
TM4SF4P48230 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 RN7SKP175-201ENST00000408472 289 ntBASIC17.5■□□□□ 0.39
TM4SF4P48230 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.5■□□□□ 0.39
TM4SF4P48230 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.5■□□□□ 0.39
TM4SF4P48230 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC007718.1-201ENST00000621078 280 ntBASIC17.5■□□□□ 0.39
TM4SF4P48230 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AC127024.7-201ENST00000625101 200 ntBASIC17.5■□□□□ 0.39
TM4SF4P48230 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TM4SF4P48230 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TM4SF4P48230 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TM4SF4P48230 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TM4SF4P48230 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TM4SF4P48230 AC006449.6-201ENST00000612330 2296 ntBASIC17.49■□□□□ 0.39
TM4SF4P48230 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF4P48230 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 AP000356.3-201ENST00000382243 753 ntBASIC17.49■□□□□ 0.39
TM4SF4P48230 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TM4SF4P48230 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TM4SF4P48230 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.49■□□□□ 0.39
TM4SF4P48230 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.49■□□□□ 0.39
TM4SF4P48230 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.49■□□□□ 0.39
TM4SF4P48230 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF4P48230 AC002472.3-201ENST00000640124 621 ntBASIC17.49■□□□□ 0.39
TM4SF4P48230 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.49■□□□□ 0.39
TM4SF4P48230 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TM4SF4P48230 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TM4SF4P48230 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TM4SF4P48230 E2F3P2-201ENST00000447755 1422 ntBASIC17.48■□□□□ 0.39
TM4SF4P48230 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TM4SF4P48230 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms