Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA4P43681 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.84■□□□□ 0.13
CHRNA4P43681 CYMP-203ENST00000474680 1263 ntBASIC15.84■□□□□ 0.13
CHRNA4P43681 AC004890.2-204ENST00000481968 304 ntBASIC15.84■□□□□ 0.13
CHRNA4P43681 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 SDHAP3-202ENST00000515467 728 ntBASIC15.84■□□□□ 0.13
CHRNA4P43681 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA4P43681 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA4P43681 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA4P43681 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA4P43681 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA4P43681 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA4P43681 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA4P43681 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA4P43681 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CHRNA4P43681 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CHRNA4P43681 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.83■□□□□ 0.13
CHRNA4P43681 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CHRNA4P43681 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC091951.1-201ENST00000512854 2465 ntBASIC15.83■□□□□ 0.12
CHRNA4P43681 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA4P43681 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.83■□□□□ 0.12
CHRNA4P43681 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 SPDYE18-201ENST00000510091 1050 ntBASIC15.83■□□□□ 0.12
CHRNA4P43681 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.83■□□□□ 0.12
CHRNA4P43681 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 AC008738.7-201ENST00000609744 511 ntBASIC15.83■□□□□ 0.12
CHRNA4P43681 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRNA4P43681 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRNA4P43681 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CHRNA4P43681 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRNA4P43681 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
CHRNA4P43681 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CHRNA4P43681 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRNA4P43681 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHRNA4P43681 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AC093214.1-201ENST00000511688 1107 ntBASIC15.82■□□□□ 0.12
CHRNA4P43681 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRNA4P43681 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRNA4P43681 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms