Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 AC126177.1-201ENST00000547829 2218 ntBASIC16.8■□□□□ 0.28
SSR1P43307 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SSR1P43307 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 HLA-H-201ENST00000383620 1096 ntBASIC16.8■□□□□ 0.28
SSR1P43307 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 AC005237.2-201ENST00000434368 219 ntBASIC16.8■□□□□ 0.28
SSR1P43307 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.8■□□□□ 0.28
SSR1P43307 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR1P43307 SLC25A39P2-201ENST00000537614 270 ntBASIC16.8■□□□□ 0.28
SSR1P43307 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.8■□□□□ 0.28
SSR1P43307 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SSR1P43307 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSR1P43307 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSR1P43307 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.8■□□□□ 0.28
SSR1P43307 AC013268.4-201ENST00000637413 2228 ntBASIC16.8■□□□□ 0.28
SSR1P43307 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 PPT1-215ENST00000641471 2368 ntBASIC16.79■□□□□ 0.28
SSR1P43307 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.79■□□□□ 0.28
SSR1P43307 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 KRT8P23-201ENST00000560090 1207 ntBASIC16.79■□□□□ 0.28
SSR1P43307 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
SSR1P43307 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSR1P43307 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
SSR1P43307 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSR1P43307 SSR4P1-203ENST00000599569 2260 ntBASIC16.79■□□□□ 0.28
SSR1P43307 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 AC087481.3-201ENST00000602886 1894 ntBASIC16.78■□□□□ 0.28
SSR1P43307 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 FAM220BP-201ENST00000377689 816 ntBASIC16.78■□□□□ 0.28
SSR1P43307 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SSR1P43307 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 MKNK2P1-201ENST00000437526 628 ntBASIC16.78■□□□□ 0.28
SSR1P43307 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSR1P43307 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.78■□□□□ 0.28
SSR1P43307 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.78■□□□□ 0.28
SSR1P43307 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.78■□□□□ 0.28
SSR1P43307 LINC01225-203ENST00000563550 1244 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms