Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 MIR4313-201ENST00000580760 101 ntBASIC15.93■□□□□ 0.14
RPA3P35244 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
RPA3P35244 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.92■□□□□ 0.14
RPA3P35244 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 PRYP6-201ENST00000514804 343 ntBASIC15.92■□□□□ 0.14
RPA3P35244 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
RPA3P35244 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.92■□□□□ 0.14
RPA3P35244 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 AC023024.2-201ENST00000623561 1993 ntBASIC15.92■□□□□ 0.14
RPA3P35244 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RPA3P35244 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.92■□□□□ 0.14
RPA3P35244 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.92■□□□□ 0.14
RPA3P35244 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RPA3P35244 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 AC148477.4-201ENST00000613430 1793 ntBASIC15.91■□□□□ 0.14
RPA3P35244 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
RPA3P35244 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
RPA3P35244 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 AC079140.1-201ENST00000508039 487 ntBASIC15.91■□□□□ 0.14
RPA3P35244 KRT8P48-201ENST00000515599 1220 ntBASIC15.91■□□□□ 0.14
RPA3P35244 IGHV3-62-201ENST00000520057 340 ntBASIC15.91■□□□□ 0.14
RPA3P35244 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.91■□□□□ 0.14
RPA3P35244 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.91■□□□□ 0.14
RPA3P35244 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RPA3P35244 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 AJ011931.1-201ENST00000618749 2492 ntBASIC15.91■□□□□ 0.14
RPA3P35244 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms