Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CTNNA1P35221 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.65■□□□□ 0.26
CTNNA1P35221 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.65■□□□□ 0.26
CTNNA1P35221 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.65■□□□□ 0.26
CTNNA1P35221 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTNNA1P35221 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CTNNA1P35221 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
CTNNA1P35221 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.64■□□□□ 0.26
CTNNA1P35221 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
CTNNA1P35221 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.64■□□□□ 0.25
CTNNA1P35221 AL139010.1-201ENST00000454878 894 ntBASIC16.64■□□□□ 0.25
CTNNA1P35221 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 KRT8P48-201ENST00000515599 1220 ntBASIC16.64■□□□□ 0.25
CTNNA1P35221 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.64■□□□□ 0.25
CTNNA1P35221 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 AC026120.1-201ENST00000611536 926 ntBASIC16.64■□□□□ 0.25
CTNNA1P35221 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CTNNA1P35221 AC005089.1-201ENST00000619486 2241 ntBASIC16.64■□□□□ 0.25
CTNNA1P35221 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CTNNA1P35221 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTNNA1P35221 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.63■□□□□ 0.25
CTNNA1P35221 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 AC023274.1-201ENST00000418278 595 ntBASIC16.63■□□□□ 0.25
CTNNA1P35221 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.63■□□□□ 0.25
CTNNA1P35221 SPDYE11-202ENST00000450699 704 ntBASIC16.63■□□□□ 0.25
CTNNA1P35221 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 AC079140.1-201ENST00000508039 487 ntBASIC16.63■□□□□ 0.25
CTNNA1P35221 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.63■□□□□ 0.25
CTNNA1P35221 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTNNA1P35221 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.63■□□□□ 0.25
CTNNA1P35221 KRT8P23-201ENST00000560090 1207 ntBASIC16.63■□□□□ 0.25
CTNNA1P35221 SPDYE9P-201ENST00000570642 692 ntBASIC16.63■□□□□ 0.25
CTNNA1P35221 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.63■□□□□ 0.25
CTNNA1P35221 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms