Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.18■□□□□ 0.66
ITGA6P23229 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ITGA6P23229 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA6P23229 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITGA6P23229 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 RNU1-114P-201ENST00000365297 166 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 CNN2P8-201ENST00000421872 913 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.17■□□□□ 0.66
ITGA6P23229 RNA5SP412-201ENST00000516234 123 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 RHOXF1P1-202ENST00000635473 501 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 AL391005.1-201ENST00000623953 2435 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 CICP13-201ENST00000422015 2789 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 KRT8P35-201ENST00000483942 1338 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.17■□□□□ 0.66
ITGA6P23229 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ITGA6P23229 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 AL513523.2-202ENST00000427283 2040 ntBASIC19.17■□□□□ 0.66
ITGA6P23229 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITGA6P23229 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ITGA6P23229 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ITGA6P23229 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 AC009090.5-201ENST00000624886 2285 ntBASIC19.16■□□□□ 0.66
ITGA6P23229 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
ITGA6P23229 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGA6P23229 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 MIR1908-201ENST00000410394 80 ntBASIC19.16■□□□□ 0.66
ITGA6P23229 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGA6P23229 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ITGA6P23229 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGA6P23229 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.16■□□□□ 0.66
ITGA6P23229 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.16■□□□□ 0.66
ITGA6P23229 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.16■□□□□ 0.66
ITGA6P23229 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 AL138709.1-201ENST00000614840 1693 ntBASIC19.16■□□□□ 0.66
ITGA6P23229 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 PRAL-201ENST00000624952 3286 ntBASIC19.16■□□□□ 0.66
ITGA6P23229 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.16■□□□□ 0.66
ITGA6P23229 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ITGA6P23229 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
ITGA6P23229 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.15■□□□□ 0.66
ITGA6P23229 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.15■□□□□ 0.66
ITGA6P23229 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.15■□□□□ 0.66
ITGA6P23229 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ITGA6P23229 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms