Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NCLP19338 PTENP1-202ENST00000532280 3996 ntBASIC18.81■□□□□ 0.6
NCLP19338 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.81■□□□□ 0.6
NCLP19338 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCLP19338 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NCLP19338 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.8■□□□□ 0.6
NCLP19338 FAM185BP-201ENST00000443595 716 ntBASIC18.8■□□□□ 0.6
NCLP19338 AL513480.1-201ENST00000451731 511 ntBASIC18.8■□□□□ 0.6
NCLP19338 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 AC112482.1-201ENST00000492080 688 ntBASIC18.8■□□□□ 0.6
NCLP19338 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.8■□□□□ 0.6
NCLP19338 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.8■□□□□ 0.6
NCLP19338 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.8■□□□□ 0.6
NCLP19338 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 AC055717.3-201ENST00000622967 595 ntBASIC18.8■□□□□ 0.6
NCLP19338 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 AC091951.1-201ENST00000512854 2465 ntBASIC18.8■□□□□ 0.6
NCLP19338 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCLP19338 SRC-202ENST00000373558 4304 ntTSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.8■□□□□ 0.6
NCLP19338 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
NCLP19338 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NCLP19338 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.79■□□□□ 0.6
NCLP19338 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.79■□□□□ 0.6
NCLP19338 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NCLP19338 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NCLP19338 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
NCLP19338 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.79■□□□□ 0.6
NCLP19338 MTDHP5-201ENST00000598980 586 ntBASIC18.79■□□□□ 0.6
NCLP19338 AC008677.1-201ENST00000519230 1561 ntBASIC18.79■□□□□ 0.6
NCLP19338 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.79■□□□□ 0.6
NCLP19338 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NCLP19338 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.78■□□□□ 0.6
NCLP19338 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NCLP19338 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms