Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC2P18074 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 MIR770-201ENST00000390219 98 ntBASIC16.15■□□□□ 0.18
ERCC2P18074 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC2P18074 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC2P18074 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 SPDYE18-201ENST00000510091 1050 ntBASIC16.15■□□□□ 0.18
ERCC2P18074 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 AC135586.1-201ENST00000539323 574 ntBASIC16.15■□□□□ 0.18
ERCC2P18074 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
ERCC2P18074 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC2P18074 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC2P18074 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 AC104640.1-201ENST00000562617 2109 ntBASIC16.15■□□□□ 0.18
ERCC2P18074 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC2P18074 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC2P18074 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC2P18074 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
ERCC2P18074 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ERCC2P18074 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
ERCC2P18074 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 RNA5SP421-201ENST00000516864 134 ntBASIC16.14■□□□□ 0.17
ERCC2P18074 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 TIMM17BP1-201ENST00000545713 516 ntBASIC16.14■□□□□ 0.17
ERCC2P18074 AC092337.1-201ENST00000568699 1129 ntBASIC16.14■□□□□ 0.17
ERCC2P18074 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC2P18074 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 C18orf15-201ENST00000623680 2534 ntBASIC16.14■□□□□ 0.17
ERCC2P18074 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ERCC2P18074 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC2P18074 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC2P18074 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ERCC2P18074 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.13■□□□□ 0.17
ERCC2P18074 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ERCC2P18074 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms