Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 AC007686.3-201ENST00000619017 3487 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PRKCAP17252 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PRKCAP17252 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PRKCAP17252 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.63□□□□□ -0.07
PRKCAP17252 AL139010.1-201ENST00000454878 894 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 AC243562.2-201ENST00000561247 970 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.63□□□□□ -0.07
PRKCAP17252 AC026979.3-201ENST00000607315 403 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 AC003101.2-201ENST00000612557 442 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.63□□□□□ -0.07
PRKCAP17252 AC112504.1-201ENST00000623415 1841 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PRKCAP17252 AL691432.1-201ENST00000596308 1422 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 AC005252.3-201ENST00000623855 2258 ntBASIC14.63□□□□□ -0.07
PRKCAP17252 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
PRKCAP17252 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.63□□□□□ -0.07
PRKCAP17252 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PRKCAP17252 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.63□□□□□ -0.07
PRKCAP17252 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.62□□□□□ -0.07
PRKCAP17252 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.62□□□□□ -0.07
PRKCAP17252 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 MIR600HG-201ENST00000449175 5984 ntBASIC14.62□□□□□ -0.07
PRKCAP17252 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 AC069262.1-201ENST00000539058 672 ntBASIC14.62□□□□□ -0.07
PRKCAP17252 BANF1P1-201ENST00000553684 263 ntBASIC14.62□□□□□ -0.07
PRKCAP17252 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.62□□□□□ -0.07
PRKCAP17252 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 AC007967.4-201ENST00000614700 386 ntBASIC14.62□□□□□ -0.07
PRKCAP17252 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.62□□□□□ -0.07
PRKCAP17252 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.62□□□□□ -0.07
PRKCAP17252 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PRKCAP17252 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PRKCAP17252 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PRKCAP17252 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms