Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 HMGN1P19-201ENST00000436976 333 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 RPL13P2-201ENST00000440687 659 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AJ011932.1-201ENST00000621707 465 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCL3L1P16619 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 AC046158.3-201ENST00000624947 2558 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 BTBD7P1-201ENST00000447253 1453 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL3L1P16619 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL3L1P16619 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL3L1P16619 AC105250.1-201ENST00000509378 2057 ntBASIC12.97□□□□□ -0.33
CCL3L1P16619 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL3L1P16619 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL3L1P16619 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL3L1P16619 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
CCL3L1P16619 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL3L1P16619 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 AC015922.1-201ENST00000421102 1152 ntBASIC12.96□□□□□ -0.33
CCL3L1P16619 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
CCL3L1P16619 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.96□□□□□ -0.33
CCL3L1P16619 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL3L1P16619 AL589987.1-201ENST00000453380 819 ntBASIC12.96□□□□□ -0.33
CCL3L1P16619 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCL3L1P16619 TIMM17BP1-201ENST00000545713 516 ntBASIC12.96□□□□□ -0.33
CCL3L1P16619 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.96□□□□□ -0.33
CCL3L1P16619 AL096865.1-201ENST00000606796 927 ntBASIC12.96□□□□□ -0.33
CCL3L1P16619 AC004790.1-201ENST00000612686 536 ntBASIC12.96□□□□□ -0.33
CCL3L1P16619 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.96□□□□□ -0.33
CCL3L1P16619 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CCL3L1P16619 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCL3L1P16619 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.96□□□□□ -0.33
CCL3L1P16619 AC136621.1-201ENST00000624017 2304 ntBASIC12.96□□□□□ -0.34
CCL3L1P16619 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL3L1P16619 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms