Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 CYP4F24P-201ENST00000586049 1580 ntBASIC17.39■□□□□ 0.37
ATP2A2P16615 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A2P16615 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A2P16615 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A2P16615 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A2P16615 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.37
ATP2A2P16615 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 AL136982.4-201ENST00000437689 1740 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 AL391256.1-201ENST00000443260 1855 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ATP2A2P16615 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A2P16615 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A2P16615 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A2P16615 PTP4A1P2-201ENST00000546033 454 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A2P16615 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A2P16615 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 LINC01115-203ENST00000606068 577 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 AL158212.4-201ENST00000624062 1286 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 Z97205.2-201ENST00000564697 1639 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 AC007950.2-201ENST00000615045 2347 ntBASIC17.38■□□□□ 0.37
ATP2A2P16615 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A2P16615 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A2P16615 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A2P16615 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A2P16615 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A2P16615 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
ATP2A2P16615 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A2P16615 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A2P16615 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP2A2P16615 AC007551.1-201ENST00000457394 519 ntBASIC17.37■□□□□ 0.37
ATP2A2P16615 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP2A2P16615 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.37■□□□□ 0.37
ATP2A2P16615 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A2P16615 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.37■□□□□ 0.37
ATP2A2P16615 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP2A2P16615 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A2P16615 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP2A2P16615 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A2P16615 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A2P16615 AL359711.2-201ENST00000563105 872 ntBASIC17.37■□□□□ 0.37
ATP2A2P16615 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A2P16615 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A2P16615 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A2P16615 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms