Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AC140113.2-201ENST00000604370 208 ntBASIC12.86□□□□□ -0.35
DEFA4P12838 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DEFA4P12838 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
DEFA4P12838 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.86□□□□□ -0.35
DEFA4P12838 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.86□□□□□ -0.35
DEFA4P12838 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
DEFA4P12838 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
DEFA4P12838 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
DEFA4P12838 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.85□□□□□ -0.35
DEFA4P12838 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
DEFA4P12838 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
DEFA4P12838 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.85□□□□□ -0.35
DEFA4P12838 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.85□□□□□ -0.35
DEFA4P12838 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.85□□□□□ -0.35
DEFA4P12838 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.85□□□□□ -0.35
DEFA4P12838 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
DEFA4P12838 AC020658.6-201ENST00000623564 1870 ntBASIC12.85□□□□□ -0.35
DEFA4P12838 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 HAUS4P1-201ENST00000406739 1145 ntBASIC12.84□□□□□ -0.35
DEFA4P12838 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.84□□□□□ -0.35
DEFA4P12838 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 SLC25A1P1-201ENST00000528351 927 ntBASIC12.84□□□□□ -0.35
DEFA4P12838 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.84□□□□□ -0.35
DEFA4P12838 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.84□□□□□ -0.35
DEFA4P12838 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.84□□□□□ -0.35
DEFA4P12838 AL513190.1-201ENST00000621254 727 ntBASIC12.84□□□□□ -0.35
DEFA4P12838 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
DEFA4P12838 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
DEFA4P12838 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms