Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AL596325.1-201ENST00000563991 1082 ntBASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 AC140912.1-201ENST00000577171 1054 ntBASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 AL109936.8-201ENST00000641772 604 ntBASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 AL136982.4-201ENST00000437689 1740 ntBASIC14.27□□□□□ -0.13
TMIGD3P0DMS9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AL391825.1-201ENST00000457671 1364 ntBASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AC087499.6-201ENST00000411576 835 ntBASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 TP53TG3HP-202ENST00000569755 579 ntBASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.26□□□□□ -0.13
TMIGD3P0DMS9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 FO393414.2-201ENST00000405153 598 ntBASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 AC245100.5-201ENST00000452108 331 ntBASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 SPDYE18-201ENST00000510091 1050 ntBASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 API5-211ENST00000534695 560 ntTSL 5 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
TMIGD3P0DMS9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms