Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC006449.6-201ENST00000612330 2296 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 AC005052.1-201ENST00000625181 2492 ntBASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RAB40ALP0C0E4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 KRT18P64-201ENST00000434946 1219 ntBASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 USP32P1-208ENST00000506594 1164 ntBASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 AL359711.2-201ENST00000563105 872 ntBASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 RPSAP52-203ENST00000622976 1023 ntBASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40ALP0C0E4 AC063926.3-201ENST00000624734 5658 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 SOCS2P1-201ENST00000417727 557 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 SLC25A47P1-201ENST00000531577 414 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AC000095.1-201ENST00000603208 874 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AC024909.3-201ENST00000611513 2257 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 INTS4P2-202ENST00000614726 2019 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 LINC00554-201ENST00000564841 3011 ntBASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.79□□□□□ -0.04
RAB40ALP0C0E4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB40ALP0C0E4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms