Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 AC013726.1-201ENST00000563747 2285 ntBASIC17.38■□□□□ 0.37
TPM1P09493 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 KRT8P44-201ENST00000441609 1350 ntBASIC17.38■□□□□ 0.37
TPM1P09493 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TPM1P09493 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM1P09493 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM1P09493 AC127383.1-201ENST00000444697 1800 ntBASIC17.37■□□□□ 0.37
TPM1P09493 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.37■□□□□ 0.37
TPM1P09493 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 AL645939.2-201ENST00000427340 991 ntBASIC17.37■□□□□ 0.37
TPM1P09493 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.37■□□□□ 0.37
TPM1P09493 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.37■□□□□ 0.37
TPM1P09493 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
TPM1P09493 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TPM1P09493 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM1P09493 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TPM1P09493 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM1P09493 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPM1P09493 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 AGAP7P-201ENST00000582299 2062 ntBASIC17.36■□□□□ 0.37
TPM1P09493 AGAP14-201ENST00000624701 2060 ntBASIC17.36■□□□□ 0.37
TPM1P09493 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM1P09493 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.36■□□□□ 0.37
TPM1P09493 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM1P09493 AC098831.1-202ENST00000438821 336 ntBASIC17.36■□□□□ 0.37
TPM1P09493 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM1P09493 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.36■□□□□ 0.37
TPM1P09493 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.36■□□□□ 0.37
TPM1P09493 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 AC012313.10-201ENST00000623509 926 ntBASIC17.36■□□□□ 0.37
TPM1P09493 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.36■□□□□ 0.37
TPM1P09493 REXO1L1P-202ENST00000608646 1974 ntBASIC17.36■□□□□ 0.37
TPM1P09493 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TPM1P09493 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 AL691432.1-201ENST00000596308 1422 ntBASIC17.36■□□□□ 0.37
TPM1P09493 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPM1P09493 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TPM1P09493 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TPM1P09493 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms